Bioconductor WGCNA package

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RNA-seq WGCNA package soft power

written 7.6 years ago by modarzi ▴ 10

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wgcna WGCNA wgcna package

6.1 years ago coyoung ▴ 10

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4.7k

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wgcna wgcna package modulepreservation

written 7.2 years ago by bekah ▴ 40

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wgcna wgcna package

7.2 years ago Jack • 0

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wgcna package wgcna

7.3 years ago anni.djurhuus • 0

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wgcna package TCGA LocusLinkID genecode ensembl

updated 7.4 years ago by James W. MacDonald 68k • written 7.4 years ago by modarzi ▴ 10

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wgcna package software error

updated 7.4 years ago by Peter Langfelder ★ 3.0k • written 7.4 years ago by giuseppe0525 • 0

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wgcna wgcna package consensus

7.4 years ago 2323982403 ▴ 60

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wgcna wgcna package

7.5 years ago antoinefelden ▴ 10

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WGCNA wgcna package

updated 7.5 years ago by Peter Langfelder ★ 3.0k • written 7.5 years ago by bdy8 ▴ 10

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wgcna wgcna package

7.6 years ago 2323982403 ▴ 60

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WGCNA wgcna package wgcna bicor

7.6 years ago bekah ▴ 40

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26k

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wgcna package

updated 7.6 years ago by Peter Langfelder ★ 3.0k • written 7.6 years ago by bekah ▴ 40

13 results • Page 1 of 1

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Comment: tximeta cannot open annotation gtf? by Michael Love 43k

Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…

Answer: tximeta cannot open annotation gtf? by ATpoint ★ 5.0k

> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…

Answer: GSEA error by James W. MacDonald 68k

At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

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Answer: GSEA error

Answer: OrgDb for maize

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

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